Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

Subject, 356 a.a., RecA protein from Sphingobium sp. HT1-2

 Score = 47.8 bits (112), Expect = 4e-10
 Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 36/249 (14%)

Query: 51  KMIMAARDLCDLGFKSGVELL---KQRQSVWRLSTGSTELDTVLA-GGIESQSVTEFAGM 106
           K + AA    D  F  G  +    +++  +  +STGS  LD  L  GG+    + E  G 
Sbjct: 20  KALEAALAQIDRAFGKGSAMKLGSREKIEIESISTGSLGLDIALGIGGLPKGRIIEIYGP 79

Query: 107 FGSGKTQIMHQTCVNLQIREKIFADLEGVVEEELEAPKAVYIDTEGTFRPERVVQMAEGA 166
             SGKT +                 L  + E +     A ++D E    P      A+  
Sbjct: 80  ESSGKTTLT----------------LHAIAEAQKAGGTAAFVDAEHALDPI----YAKKL 119

Query: 167 GIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIKGGNNIKLVIIDSLTSTF-RNEFTGR- 224
           G+D    +D   V++    +  +    +I D +   N I ++++DS+ +   R E  G  
Sbjct: 120 GVD----IDELIVSQPDTGEQAL----EIVDTLVRSNAIDILVVDSVAALVPRAEIEGEM 171

Query: 225 --GKLAERQQKLGRHMATLNKLADLYNCIVLVTNQVAAKPDAYFGVAEQAIGGHVVGHAA 282
               +  + + + + +  L        C+V+  NQV  K    +G  E   GG+ +   A
Sbjct: 172 GDSHVGLQARLMSQALRKLTGSIARSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYA 231

Query: 283 TFRFFLRKS 291
           + R  +R++
Sbjct: 232 SVRLDIRRT 240