Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

Subject, 496 a.a., transcription termination/antitermination protein NusA from Dickeya dianthicola ME23

 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 2   ADVLTELPGVGPSTADKLIEGGYLDFMKIATATIGELTDIEGISEKAAAKMIMAARDLCD 61
           A+ L  L G+    A KL   G      +A   + +L DIEG+ E+ A ++IMAAR++C 
Sbjct: 431 AEDLLNLSGLSRELAFKLAACGVCTLEDLAEQGVDDLADIEGLGEEQAGELIMAARNICW 490

Query: 62  LG 63
            G
Sbjct: 491 FG 492



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 10/121 (8%)

Query: 3   DVLTELPGVGPSTADKLIEGGYLDFMKIATATIGELTDIEGISE---KAAAKMIMAARDL 59
           D+ T+   +    A  L+E G+    ++A   I EL DI+G+ E   +A  +   AA   
Sbjct: 357 DIFTKHLDIDEEFATALVEEGFSSLEELAYVPIHELQDIDGLDEETIEALRERAKAALTT 416

Query: 60  CDLGFKSGVELLKQRQSVWRLSTGSTELDTVLAG-------GIESQSVTEFAGMFGSGKT 112
             L  +      +  + +  LS  S EL   LA         +  Q V + A + G G+ 
Sbjct: 417 LALANEENRGSGQPAEDLLNLSGLSRELAFKLAACGVCTLEDLAEQGVDDLADIEGLGEE 476

Query: 113 Q 113
           Q
Sbjct: 477 Q 477