Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

Subject, 495 a.a., transcription termination/antitermination L factor from Escherichia coli BL21

 Score = 44.3 bits (103), Expect = 6e-09
 Identities = 25/62 (40%), Positives = 34/62 (54%)

Query: 2   ADVLTELPGVGPSTADKLIEGGYLDFMKIATATIGELTDIEGISEKAAAKMIMAARDLCD 61
           AD L  L GV    A KL   G      +A   I +L DIEG++++ A  +IMAAR++C 
Sbjct: 431 ADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICW 490

Query: 62  LG 63
            G
Sbjct: 491 FG 492



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 3   DVLTELPGVGPSTADKLIEGGYLDFMKIATATIGELTDIEGISE 46
           D  T+   +    A  L+E G+    ++A   + EL +IEG+ E
Sbjct: 357 DTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDE 400