Pairwise Alignments

Query, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis S2

Subject, 751 a.a., ATP-dependent DNA helicase from Pseudomonas simiae WCS417

 Score = 69.3 bits (168), Expect = 6e-16
 Identities = 124/635 (19%), Positives = 244/635 (38%), Gaps = 83/635 (13%)

Query: 14  FPYHGMRPQQEVLMGKIYECVTKKKNLVVEAPTGVGKTLSYLIPAL--YFAERGKRVMIL 71
           FP+ G RP Q  L   +Y+ V+  + L+ +APTG+GKT+  + P L     +R  ++  L
Sbjct: 178 FPHAGFRPGQRSLAESVYKAVSTGRCLMAQAPTGIGKTIGTIFPLLKALAPQRLDKLFFL 237

Query: 72  TETIDQQERIVE-----DLNSLKHNLKVSFMMGKGNFFCKAKGEKANTLYCQLNKGCIYR 126
           T     ++  ++       +S    L+V  ++ +    C+   +  +   C L KG  + 
Sbjct: 238 TAKTPGRKLALDAAQVLHASSPDQPLRVLELVARDK-ACEHLDKACHGDACPLAKG--FY 294

Query: 127 PNKKPVCVCGTKKEKIEFDGNTTFYCPLCLCDYQKAKIESFDANIIVMNNSIYYYLKDEI 186
                  +   K   ++            +C Y  ++  +  A+++V + + Y+     +
Sbjct: 295 DRLPAARIAAAKVRLLDQRNLRDVALAHDVCPYYLSQEMARWADLVVADYNYYFDFGAML 354

Query: 187 DKKKQTD----IVICDEAHKLEGSIRNAATIVINPKYALRRLRFMAYHYSNSRLRVHMDR 242
               Q +     V+ DEAH L    R+  +  ++ +Y L+ LR  A       L+  + R
Sbjct: 355 FGLAQLNQWRAAVLVDEAHNLVERARSMYSASLD-QYHLKTLRETA----PEPLKQPLQR 409

Query: 243 VTEEDDEIFWTIVEDYVVKNASGKDCKNSLVFDGFKITSFGLKEDVAILGTLLEGYNEIV 302
           +    + +    +  Y    A  +    +L      +  +      ++ G L   Y E++
Sbjct: 410 LNRAWNALHKDQLAPYQAYTARPEKLLQALSLCASAMGEYFNDHPESLSGDLQRFYFEVL 469

Query: 303 KIKEKIEDLSEN--EELDKKDLKFKIDNKALIPLELQFVADRRISDVPMVEFLENLGNLR 360
           +  +  E  +E+   ++ K+ L  K  +  L            + +V   EF+       
Sbjct: 470 QFGKVAELFNEHFIFDISKRQLNGKRSSSTLC-----------LRNVVPAEFI------- 511

Query: 361 NITGNFVVYKNNGSILCEPVLVSTYLNRLYGDASVVHCSATLGDLKIHAIKTGMGRSETL 420
                             P L +   + L+        SATL     +A   G+      
Sbjct: 512 -----------------RPRLTAARSSVLF--------SATLSPRHYYADLLGLPADTAW 546

Query: 421 L-LDSPFSKDRRNIIALSDGEDMKFNSIDFQSNNKKRNKANENLFKMVNAAKGNTLILFK 479
           + ++SPF  ++ ++  + +       S  F   +       E + +      GN L  F 
Sbjct: 547 IDVESPFKAEQLHVRIVDE------ISTRFVHRHASLEPIVELIARQYTQQPGNYLAFFS 600

Query: 480 SFGDLKTAHEYFLDAGYRGNIYCYESGMDGKAAKKLKEDFQKYG---GLLLATGRFAEGV 536
           SF  L+   +   +      ++    GM     +   + F ++    G  +  G F EG+
Sbjct: 601 SFDYLQQVAQLLAEKHPTITLWQQSRGMAEAERQAFLDQFTEHSQGIGFAVLGGAFGEGI 660

Query: 537 DIPGDALTCVIIDSLPFPVPTPLLKREQTLLEERLKSRKVKDAHWSAFLMTSFHIMARTV 596
           D+PG  L    I +L  P   P        + E++K R +     + +  T  +   + V
Sbjct: 661 DLPGARLIGAFIATLGLPQLNP--------VNEQMKLR-MGAIFGAGYDYTYLYPGIQKV 711

Query: 597 IQMIGRLIRTETDYGVVVIQDKRFNDWVGSEMLKR 631
           +Q  GR+IR++ D GVV++ D RF +    ++L R
Sbjct: 712 VQAAGRVIRSQQDQGVVMLIDDRFGEARVRQLLPR 746