Pairwise Alignments

Query, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis S2

Subject, 714 a.a., putative Helicase from Pseudomonas putida KT2440

 Score = 50.4 bits (119), Expect = 3e-10
 Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 32/289 (11%)

Query: 338 FVADRRISDVPMVEFLENLGNLRNITGNFVVYKNNGSILCEPVLVSTYLNRLYGDASVVH 397
           F A+      PM  +L     L      F +  N   IL   +L  +  +  +G      
Sbjct: 429 FTAEDPEDSPPMARWL----TLAESGALFDIEVNASPILAADMLRRSLWSVAHGALVTSA 484

Query: 398 CSATLGDLKIHAIKTGMGRSE-TLLLDSPFSKDRRNIIALSDGEDMKFNSIDFQSNNKKR 456
               LG      +++G+ R   T ++ SPF      ++ + D   ++ +  D  ++    
Sbjct: 485 TLTALGKFDRFRMRSGLPRDAVTCVVPSPFVHGDAGLLRVPD---LQADPRDAAAHTAAI 541

Query: 457 NKANENLFKMVNAAKGNTLILFKSFGDLKTAHEYFLDAGYR------GNIYCYESGMDGK 510
            +   N+   V  A+G  L+LF S   ++   +  LD  +R      GN+   E+    K
Sbjct: 542 IRELPNI---VEDARG-ALVLFSSRKQMQDVFDG-LDRDWRKLVLIQGNLSKQETLNKHK 596

Query: 511 AAKKLKEDFQKYGGLLLATGRFAEGVDIPGDALTCVIIDSLPFPVPTPLLKREQTLLEER 570
           A     +D Q    +L     FAEGVD+PG     V+I  +PF VP   +   +  L E 
Sbjct: 597 ARV---DDGQH--SVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPV---EAALAEW 648

Query: 571 LKSRKVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGVVVIQDKR 619
           +++R       + F+  +    +  +IQ  GRL+RTE D GV+ + D+R
Sbjct: 649 IEAR-----GGNPFMEIAVPDASLKLIQACGRLLRTEQDRGVITLLDRR 692



 Score = 45.8 bits (107), Expect = 7e-09
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 6/75 (8%)

Query: 40  LVVEAPTGVGKTLSYLIPALYFAE-RGKRVMILTETIDQQERIV-EDLNSLKH----NLK 93
           + VEA TG GKT++Y + A+  A+  GKR++I T T+  QE+IV +DL  L      N  
Sbjct: 58  VAVEAGTGTGKTVAYSLAAIPAAKAAGKRLVIATATVALQEQIVFKDLPDLMRSSGLNFS 117

Query: 94  VSFMMGKGNFFCKAK 108
            +   G+G + C +K
Sbjct: 118 FALAKGRGRYLCLSK 132