Pairwise Alignments

Query, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis S2

Subject, 636 a.a., putative ATP-dependent DNA helicase YoaA from Escherichia fergusonii Becca

 Score = 64.3 bits (155), Expect = 2e-14
 Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 26/231 (11%)

Query: 394 SVVHCSATLG---DLKIHAIKTGMGRSETLLLDSPFSKDRRNIIALSDGEDMKFNSIDFQ 450
           S +  SATL    DL     + G+  +E+LLL SPF   R+ ++ +         ++   
Sbjct: 391 SWIFTSATLSVNDDLHHFTSRLGIELAESLLLPSPFDYSRQALLCVP-------RNLPQT 443

Query: 451 SNNKKRNKANENLFKMVNAAKGNTLILFKSFGDLKTAHEYFLDAGYRGNIYCYESGMDGK 510
           +      +    L  ++ A  G   +L  S   ++   E F        +      + G+
Sbjct: 444 NQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVL------LQGE 497

Query: 511 AAK-KLKEDFQKYGG-LLLATGRFAEGVDIPGDALTCVIIDSLPFPVPTPLLKREQTLLE 568
            +K +L + F   G  LL+AT  F EGVD+ GD L+ VIID LPF  P      +  LL+
Sbjct: 498 TSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSP------DDPLLK 551

Query: 569 ERLKSRKVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGVVVIQDKR 619
            R++  +++      F          T+ Q +GRLIR   D GV+VI D R
Sbjct: 552 ARMEDCRLRGG--DPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR 600



 Score = 55.5 bits (132), Expect = 8e-12
 Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 37/214 (17%)

Query: 21  PQQEVLMGKIYECVTKKKNLVVEAPTGVGKTLSYLIPALYFAERGKRVMILTETIDQQER 80
           PQ+++ +  + + + K + LVVEA TG GKT +YL PAL      K+V+I T +   Q++
Sbjct: 23  PQRQMAVA-VTQAIEKGQPLVVEAGTGTGKTYAYLAPAL---RAKKKVIISTGSKALQDQ 78

Query: 81  IV-EDL----NSLKHNLKVSFMMGKGNFFCKAKGEK----ANTLYCQLNKGCIYRPNKKP 131
           +   DL     +LK+   V+ + G+ N+ C  + E+       L  Q+    I   +   
Sbjct: 79  LYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSN 138

Query: 132 VCVCGTKKEKIEFDGNTTFY--------------CPLCL-CDYQKAKIESFDANIIVMNN 176
             V G     +    ++  +              CP+   C   KA+ ++ DA+++V+N+
Sbjct: 139 QTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNH 198

Query: 177 SIYYYLKDEIDKKK-------QTDIVICDEAHKL 203
             + +L D + K+        + D++I DEAH+L
Sbjct: 199 --HLFLADMVVKESGFGELIPEADVMIFDEAHQL 230