Pairwise Alignments

Query, 492 a.a., cobyric acid synthase CobQ from Methanococcus maripaludis S2

Subject, 483 a.a., cobyric acid synthase from Pseudomonas simiae WCS417

 Score =  280 bits (716), Expect = 8e-80
 Identities = 174/487 (35%), Positives = 265/487 (54%), Gaps = 22/487 (4%)

Query: 5   IMVVGTSSNSGKTVLVSGICRMLSNKGYKVAPFKSQNMSLNSRVSVEDGEIAVAQYTQAM 64
           +MV GT+S++GK+ LV+ +CR L  +G  V PFK QNM+LNS V+ E GEI  AQ  QA 
Sbjct: 4   LMVQGTTSDAGKSTLVTALCRWLVRQGVAVVPFKPQNMALNSAVTAEGGEIGRAQAVQAQ 63

Query: 65  AARAEPSVHFNPILLKPKGNFVSQVIVHGNPYEDKDYNEYRSKKDDFLVKIKESIDYLDK 124
           AA   P    NP+LLKP  +  SQVI+HG      +   Y   K   +  +  S   L +
Sbjct: 64  AANLAPHTDMNPVLLKPNSDTGSQVIIHGRAVTTMNAVAYHDYKSIAMQAVLASHARLSQ 123

Query: 125 NYDYVVIEGAGSCCEINLLNDDIANLKVAEIAGADAILVSDIDRGGVFASIYGTVQLLPE 184
            Y  V++EGAGS  EINL  +DIAN+  AE      +L++DI+RGGVFA + GT++LL  
Sbjct: 124 AYPVVMVEGAGSPAEINLRANDIANMGFAEAVDCPVLLIADINRGGVFAHLVGTLELLSP 183

Query: 185 NWKKLLKGFVINKFRGNIDVLKDGFEKIEELTNIPVIGTIPYDETLVLPEEDSQALDGKR 244
             +  +KGF+IN+FRG+I +L+ G + +E  T  PV+G +PY   L L  ED   +D +R
Sbjct: 184 TEQARVKGFIINRFRGDIALLQPGLDWLEARTGKPVVGVLPYVMDLHLEAED--GID-RR 240

Query: 245 VFGNLKSPIEVNVVKFSKIANFTDVDP--FSSDCLMKYIDFNENI-TGDILILPGTRCST 301
               +   ++V V    +I+N TD DP        +++I   + I   D++ILPG++   
Sbjct: 241 QTDKVAQVLKVVVPVLPRISNHTDFDPLRLHPQVDLQFIGPGQPIPAADLIILPGSKSVR 300

Query: 302 VEMDLMKKYGMDKKILEFVENGGIVLGICGGYQALGKMLFDEDFSEGDVGTISGLGLFDM 361
            ++  ++  G D  +   +  GG VLGICGG Q LG+ + D    EG  G+  GLGL   
Sbjct: 301 SDLSYLRTNGWDTAVARHLRYGGKVLGICGGLQMLGEQVHDPLGLEGPAGSSDGLGLLAF 360

Query: 362 ETTFGNKKAIKNSTGKISIFNQNFDVSGYELHEGYSVSN--ETPLISLSKGFGNCGDSYD 419
            TT   +K ++N  G++ +  ++ +V GYE+H G +  +      + L  G  +   S D
Sbjct: 361 STTLEEEKQLRNVRGRLLL--EDAEVCGYEIHAGVTSGDALSNAAVLLDDGRTDGAQSAD 418

Query: 420 GSFKMIGDSYIFGTYFHGILENFEFRNYLVNLARSKKNLSKIEDDTYAELFNENMDKLSK 479
           G         I GTY HG+ E+    + L+  A     L  ++   Y  L   ++++L+ 
Sbjct: 419 GQ--------ILGTYLHGLFESPAACSALLRWA----GLQDVQAVDYHALRERDIERLAD 466

Query: 480 IIEENLD 486
           ++E +LD
Sbjct: 467 LVENHLD 473