Pairwise Alignments

Query, 392 a.a., thiolase domain-containing protein from Methanococcus maripaludis S2

Subject, 389 a.a., 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Variovorax sp. SCN45

 Score =  171 bits (434), Expect = 3e-47
 Identities = 124/350 (35%), Positives = 175/350 (50%), Gaps = 14/350 (4%)

Query: 3   DVAIIGYGQTKFGELWEESFRSLIVEAGVKAISDANVDGDDIDAMYVGTMSGGLFVGQEH 62
           D  I G+G T FG+L       LI +A   A++ A ++  DID ++VG  + G FV Q+ 
Sbjct: 4   DTFITGWGHTPFGKLDAADGEQLIRDAVEPALATAGLEAADIDGIFVGHFNSG-FVPQDF 62

Query: 63  SASLIA-DYAGLNPVPCTRVEAACASGSLALRSACLSIASGAHDVVLVGGVEKMTDVADA 121
           SASL+A    GL  VP  R+E ACA+GS A+ +A  ++ASG     LV G E M  V   
Sbjct: 63  SASLVALAVPGLRHVPAVRLENACATGSAAIWAALDAVASGRVRHALVVGFEIMNAVPGP 122

Query: 122 TSA--IATASDQEWEAFVGATFPSLYAMMAKRYMHEYGLTIEQLSSWSAIAHENAVHNKY 179
             A  +   S  + E    A F  ++  +A  Y   +G   + L++ +A  H N  HN Y
Sbjct: 123 VIAQTLLRCSYVKEEGATPAGFAGVFGNIAGGYFERFGDQSDALAAIAAKNHANGTHNPY 182

Query: 180 AQFRSKVTIDQVMRASP----VADPLTLLHCSPVSDGASALIICDAEKATEYAPKDEIIY 235
           A  R  +  D     S     VA PL    CS VSDGA+AL+I  A  A+   P    + 
Sbjct: 183 AHMRRDLGFDFCRNPSDKNPFVAGPLKRSDCSLVSDGAAALVISAAPLASAKVP---AVR 239

Query: 236 IKASTQASDTIALHDRKDMTTLNAAKVASDKAYKIAGIDAKKVDVAEVHDCFAINGLVLT 295
            ++ TQ +D + L  R+D T    A +A  +  + A +    +   E HDCF I  L+  
Sbjct: 240 WRSRTQVNDYLPL-SRRDPTRFEGAALAWSRGLEAARLKLDDLGFVETHDCFTIAELLEY 298

Query: 296 EDLGFCKKGDAGKVVESGKTRIDDESFVTVNPSGGLKAAGHALGATGIRQ 345
           E +G    G   + +  G TR D    + VNPSGGLK+ GH +GATG+ Q
Sbjct: 299 EAMGLAPHGQGARAILDGVTRKDGR--LPVNPSGGLKSRGHPIGATGVSQ 346