Pairwise Alignments

Query, 392 a.a., thiolase domain-containing protein from Methanococcus maripaludis S2

Subject, 387 a.a., 3-ketoacyl-CoA thiolase FadA from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 84/334 (25%), Positives = 135/334 (40%), Gaps = 65/334 (19%)

Query: 44  IDAMYVGTMSGGLFVGQE--HSASLIADYAGLNPVPCTRVEAACASGSLALRSACLSIAS 101
           +D +Y G +   L  G     +A+L+A+    + VP   V   C S   AL  A   I +
Sbjct: 50  LDDIYWGCVQQTLEQGFNIARNAALLAEVP--HSVPAVTVNRLCGSSMQALHDAARMIMT 107

Query: 102 GAHDVVLVGGVEKMTDVADATSAIATASDQEWEAFVGATFPSLYAMMAKRYMHEYGLTIE 161
           G     LVGGVE M  V   +  +             A    L A M  R MH  G++ E
Sbjct: 108 GDAQACLVGGVEHMGHV-PMSHGVDFHPGLSRNVAKAAGMMGLTAEMLAR-MH--GISRE 163

Query: 162 QLSSWSAIAHENA-VHNKYAQFRSKV-------------------------TIDQVMRAS 195
              +++A +H  A    + A F++++                         T++ +    
Sbjct: 164 MQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLR 223

Query: 196 PVADP----LTLLHCSPVSDGASALIICDAEKATEYAPKDEIIYIKASTQASDTIALHDR 251
           P  DP    +T    S +SDGA+A+++    +A E   K      +A  ++   +     
Sbjct: 224 PAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKP-----RARVRSMAVVGC--- 275

Query: 252 KDMTTLNAAKV-ASDKAYKIAGIDAKKVDVAEVHDCFAINGLVLTEDLGFCKKGDAGKVV 310
            D + +    V AS  A K AG+ A  + V E+++ FA   L   +DLG  +        
Sbjct: 276 -DPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLME-------- 326

Query: 311 ESGKTRIDDESFVTVNPSGGLKAAGHALGATGIR 344
                +ID++    +N +GG  A GH LG +G R
Sbjct: 327 -----QIDEK----INLNGGAIALGHPLGCSGAR 351