Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 326 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) from Variovorax sp. SCN45

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 70/326 (21%), Positives = 124/326 (38%), Gaps = 45/326 (13%)

Query: 6   IVGYGSDLPKYRIKAEDIA------GAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQS 59
           I G GS LP  R+  +D+A      G    D   ++R   ++ +    P+  ++ +  ++
Sbjct: 8   ITGTGSYLPPRRVTNDDLAKELATRGIETSDQWIVER-TGIHARHFAAPEVTSSDLGYEA 66

Query: 60  ARRALSRAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTA 119
           AR AL  AG    D+  + V + +       ++ I+    G++    A D++  C     
Sbjct: 67  ARHALEAAGRKASDVDLIIVATSTPDMVFPSSAAILQHKLGIA-GCPAFDVQAVCSGFVY 125

Query: 120 GIQMCMGLVGSEMMEYAMAVGADTAQGAPGDALEYTAAA----GGAAFIIGAKKEEFIAK 175
            + +   ++ +     A+ +GA+       D  + T       G  A ++ A +E  I  
Sbjct: 126 ALTVADAMIRTGTARCALVIGAEVFSRIL-DFNDRTTCVLFGDGAGAVVLEASEEPGILA 184

Query: 176 FNGTYSYTTDTPDFWRREHEHY-----PKH--GGRFTGEP-------AYFKHVLN----G 217
            +               + +H      P H  GG   G P       A FK  +      
Sbjct: 185 SD------------LHADGKHVGILCVPGHVSGGNVLGTPLLHMDGQAVFKLAVRVLEEA 232

Query: 218 AKGMMEKMGTTSKDYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVP 277
           A+  + K G T  D D+ + HQ N +     A+KL    E  K  +     GNT + ++P
Sbjct: 233 ARATLAKAGKTEADIDWLIPHQANIRIMEGTARKLKLPRE--KLIVTVNEHGNTSAASIP 290

Query: 278 LGLSNILDHAKADDRIFVVSYGSGAG 303
           L L   +   K      ++  G G G
Sbjct: 291 LALDEAVRSGKVKKGETLMLEGVGGG 316