Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 324 a.a., 3-oxoacyl-ACP synthase III from Magnetospirillum magneticum AMB-1

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 69/321 (21%), Positives = 121/321 (37%), Gaps = 36/321 (11%)

Query: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRALS 65
           I+G GS LP   +   ++A       + I     + ++ +    E T+ +A  +A RAL 
Sbjct: 7   IIGCGSYLPSRLVTNAELAAQVDTSDEWIVERSGIRQRHIAAEGETTSDLATNAALRALE 66

Query: 66  RAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQMCM 125
            AGI+   +  V V + +       T+  V    G+   F A D++  C      + +  
Sbjct: 67  AAGISGSAVDLVIVATATPDNTFPATATKVQSRIGMRHGF-AFDVQAVCSGFVYALSVAD 125

Query: 126 GLVGSEMMEYAMAVGADTAQGAPGDALEYTAAA-------GGAAFIIGAKKEEFIAKFNG 178
             + S  ++ A+ +GA+T        L++T          G  A ++ A + +  +   G
Sbjct: 126 NFIKSGQVQTALVIGAETF----SRILDWTDRTTCVLFGDGAGAVVLRASRGKGSSADRG 181

Query: 179 TYSYTTDTPDFWRREHEHYP---KHGG----------RFTGEPAYFKHVLNGAKGMMEKM 225
             S           +  HY      GG             G   +   V+N A  + E +
Sbjct: 182 ILS------THLHSDGSHYDLLYVDGGPSSTQTVGHVHMEGREVFRHAVINLAAVVGEAL 235

Query: 226 GTT---SKDYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSN 282
                 + D D+ V HQ N +     AKKLGF  +  K  +      NT + ++PL L+ 
Sbjct: 236 AANDLKASDIDWVVPHQANRRIIEGTAKKLGFPLD--KMVMTVERHANTSAASIPLALTE 293

Query: 283 ILDHAKADDRIFVVSYGSGAG 303
            +   +      V+    G G
Sbjct: 294 AVGDGRIKPGQLVLLEAMGGG 314