Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 317 a.a., ketoacyl-ACP synthase III from Serratia liquefaciens MT49

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 80/298 (26%), Positives = 122/298 (40%), Gaps = 19/298 (6%)

Query: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRALS 65
           I+G GS LP       D+        + I     + E+ +   DE  AT+   +A +AL 
Sbjct: 5   ILGTGSYLPVQVRTNADLEKMVDTSDEWIVTRTGIRERRIAAADETVATMGFHAAEKALE 64

Query: 66  RAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQMCM 125
            AG+  +DIG + V + +  +A   ++  V +  G+  D  A DL  AC   T  + +  
Sbjct: 65  MAGVAKEDIGLIVVATTTSSHAFPSSACQVQQMLGIK-DCAAFDLAAACAGFTYALSVAD 123

Query: 126 GLVGSEMMEYAMAVGADTAQGA--PGDALEYTAAAGGA-AFIIGAKKEEFIAK----FNG 178
             V +  ++ A+ +GAD       P D         GA A ++GA +E  I       +G
Sbjct: 124 QYVKNGAVKRALVIGADVLSRTLDPDDRGTIILFGDGAGAVVLGASEEPGILSTHLHADG 183

Query: 179 TYSYTTDTPDFWRREHEHYPKHGGRFTGEPAYFKHVLNGAKGMMEKMGTTSKD---YDYC 235
           TY      P F  R+ +  P +     G   +   V   A  + E +     D    D+ 
Sbjct: 184 TYGGLLTLP-FKDRQDQEKPAY-VTMAGNEVFKVAVTELAHIVDETLQANDLDRSQLDWL 241

Query: 236 VFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSNILDHAKADDRI 293
           V HQ N +     AKKLG   +  K  +     GNT + +VP      LD A  D RI
Sbjct: 242 VPHQANLRIISATAKKLGMGMD--KVVVTLDRHGNTSAASVPAA----LDEAVRDGRI 293