Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 317 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 73/309 (23%), Positives = 123/309 (39%), Gaps = 19/309 (6%)

Query: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRALS 65
           I+G GS LP+      D+        + I     + ++ +  P+E  AT+   +A RA+ 
Sbjct: 5   IIGTGSYLPEQVRTNADLEKMVETSDEWIVTRTGIRKRHIAAPNETVATMGFTAANRAIE 64

Query: 66  RAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQMCM 125
            AGI+   IG + V + S  +A    +  +    G+     A D+  AC   T  + +  
Sbjct: 65  MAGIDKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSIAD 123

Query: 126 GLVGSEMMEYAMAVGADTAQGA--PGDALEYTAAAGGA-AFIIGAKKEEFIAK----FNG 178
             V S  +++A+ VG+D       PGD         GA A ++ A +E  I       +G
Sbjct: 124 QYVKSGAVKHALVVGSDVLARTCDPGDRGTIIIFGDGAGAAVLSASEEPGIISTHLHADG 183

Query: 179 TYSYTTDTPDFWRREHEH--YPKHGGR--FTGEPAYFKHVLNGAKGMMEKMGTTSKDYDY 234
            Y      P+  R   ++  Y    G   F        H+++     +        + D+
Sbjct: 184 RYGELLTLPNADRVNPDNPIYLTMAGNEVFKVAVTELAHIVDET---LAANNLDRSELDW 240

Query: 235 CVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSNIL--DHAKADDR 292
            V HQ N +     AKKLG + +     L     GNT + +VP  L   +     KA   
Sbjct: 241 LVPHQANLRIISATAKKLGMSMDNVVVTL--DRHGNTSAASVPCALDEAVRDGRIKAGQL 298

Query: 293 IFVVSYGSG 301
           + + ++G G
Sbjct: 299 VLLEAFGGG 307