Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 317 a.a., ketoacyl-ACP synthase III from Erwinia tracheiphila SCR3

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 19/298 (6%)

Query: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRALS 65
           I+G GS LP+      D+        + I     + E+ +   DE  A++  Q+A RAL 
Sbjct: 5   IIGTGSYLPEKVRTNADLEKMVDTSDEWIVTRTGICERRIAAADETVASMGFQAAERALD 64

Query: 66  RAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQMCM 125
            AGI   +I  + V + S  +A   ++ ++ +  G++ D TA DL  AC      + +  
Sbjct: 65  MAGIEQNEIELIVVATTSSSHAFPSSACMIQQMLGIN-DATAFDLAAACAGFAYALSVAD 123

Query: 126 GLVGSEMMEYAMAVGADTAQGA--PGDALEYTAAAGGA-AFIIGAKKEEFIAK----FNG 178
             + +  +++A+ +GAD       P D         GA A ++GA ++  I       +G
Sbjct: 124 QYIKNGTVKHALVIGADVLARTLDPDDRSTLILFGDGAGAVVLGASEQPGIISTHLHADG 183

Query: 179 TYSYTTDTPDFWRREHEHYPKHGGRFTGEPAYFKHVLNGAKGMMEKMGTTSKD---YDYC 235
            YS     P +  R+H+  P +     G   +   V   A  + E +   + D    D+ 
Sbjct: 184 RYSQLLTLP-YQDRQHQEQPAY-LTMAGNEVFKVAVTELAHIVDETLQANNLDREAIDWL 241

Query: 236 VFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSNILDHAKADDRI 293
           V HQ N +     A+KLG   E  K  +     GNT + +VP    + LD A  D RI
Sbjct: 242 VPHQANLRIISATARKLGIGME--KVVVTLDRHGNTSAASVP----SALDEAVRDGRI 293



 Score = 23.5 bits (49), Expect = 0.008
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 248 AAKKLGFTEEQYKYGLLTPYLGN-TYSGAVPLGLSNILDHAKADDRIFVVSYGSGAGS 304
           AA   GF    Y   +   Y+ N T   A+ +G   +      DDR  ++ +G GAG+
Sbjct: 109 AAACAGFA---YALSVADQYIKNGTVKHALVIGADVLARTLDPDDRSTLILFGDGAGA 163