Pairwise Alignments

Query, 349 a.a., hydroxymethylglutaryl-CoA synthase from Methanococcus maripaludis S2

Subject, 316 a.a., ketoacyl-ACP synthase III from Dickeya dianthicola ME23

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 77/309 (24%), Positives = 125/309 (40%), Gaps = 42/309 (13%)

Query: 6   IVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATIAVQSARRALS 65
           I+G GS LP+      D+        + I     + E+ +  PDE  A +  ++A+ AL 
Sbjct: 5   ILGTGSYLPEQIRTNADLEKMVETSDEWIVTRTGIRERRIAAPDESVAFMGYRAAQNALD 64

Query: 66  RAGINPKDIGAVYVGSESHPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGTAGIQMCM 125
            AG++   +G + V + S  +A   ++  + +  G+  D  A DL  AC      + +  
Sbjct: 65  MAGVDGNQVGLLIVATTSSSHAFPSSACQIQQMLGIK-DTIAFDLAAACAGFAYALSVAD 123

Query: 126 GLVGSEMMEYAMAVGADTAQGA-----PGDALEYTAAAGGAAFIIGAKKEEFIAK----F 176
             V S  ++YA+ +G+D    A      G  + +  AAG  A ++G  +   I       
Sbjct: 124 QYVKSGAVDYALVIGSDALSRALDPADRGTLILFGDAAG--AVLLGRSEAPGILSTHLHA 181

Query: 177 NGTYSYTTDTPDFWRREHEHYPKHGGRFTGEPAY--------FKHVLNGAKGMMEK---- 224
           +G Y      P            H  R   +PAY        FK  +     ++E+    
Sbjct: 182 DGRYGNLLALP------------HADRQEPQPAYLTMAGNEVFKVAVTELAHIVEETLDA 229

Query: 225 MGTTSKDYDYCVFHQPNGKFYLTAAKKLGFTEEQYKYGLLTPYLGNTYSGAVPLGLSNIL 284
            G    + D+ V HQ N +     AKKLG   +  K  +     GNT + +VP    + L
Sbjct: 230 SGLNKSELDWLVPHQANLRIISATAKKLGMGMD--KVVVTLDRHGNTSAASVP----SAL 283

Query: 285 DHAKADDRI 293
           D A  D RI
Sbjct: 284 DEAVRDGRI 292