Pairwise Alignments

Query, 410 a.a., translation initiation factor IF-2 subunit gamma from Methanococcus maripaludis S2

Subject, 616 a.a., Selenocysteine-specific translation elongation factor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 88.2 bits (217), Expect = 6e-22
 Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 35/240 (14%)

Query: 11  IGMVGHVDHGKTSLTRKLTGVWTDTHSEELKRGISIRLGYADCEIKKCETCDEPECYTVG 70
           I   GHVDHGKT+L + +TGV  D   EE KRG++I LGYA           +P+   +G
Sbjct: 3   IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYA--------YWPQPDGRVLG 54

Query: 71  KKCDSCGGKLQTLRKISFVDAPGHETLMATMLSGASLMDGAILVIAASEECPQPQTKEHL 130
                            F+D PGHE  ++ ML+G   +D A+LV+A  ++    QT+EHL
Sbjct: 55  -----------------FIDVPGHEKFLSNMLAGVGGIDHALLVVAC-DDGVMAQTREHL 96

Query: 131 MALDALGVEKIIIVQNKIDLVSEEAAVENYNQIKEFTKGTVAENAPIIPVSAHHGANLDV 190
             L   G  ++ +   K D V E    E   ++          +  +   +A+ G  +  
Sbjct: 97  QILQLTGNLQLTVALTKADRVDEARIGEVREEVLAALDNYGFADTVLFVTAANEGRGIAE 156

Query: 191 LLKAIQDFIPTPERDETVSPKLYVARSFDVNKPGSEIKDLKGGVIGGSIIQGALKVGDEL 250
           L   +Q  +P          +L + R+F V   G         V+ G+ + G + VGD L
Sbjct: 157 LRAHLQQ-LPARSHAAQHRFRLAIDRAFTVKGAGL--------VVTGTALSGEVNVGDTL 207