Pairwise Alignments

Query, 410 a.a., translation initiation factor IF-2 subunit gamma from Methanococcus maripaludis S2

Subject, 260 a.a., small GTP-binding protein domain from Enterobacter asburiae PDN3

 Score =  105 bits (261), Expect = 2e-27
 Identities = 86/275 (31%), Positives = 129/275 (46%), Gaps = 60/275 (21%)

Query: 9   VNIGMVGHVDHGKTSLTRKLTGVWTDTHS-------------EELKRGISIRLGYADCEI 55
           VN+G +GHVDHGKT+LT  +T V   T+              EE  RGI+I   + +   
Sbjct: 13  VNVGTIGHVDHGKTTLTAAITTVLAKTYGGSARAFDQIDNAPEEKARGITINTSHVE--- 69

Query: 56  KKCETCDEPECYTVGKKCDSCGGKLQTLRKISFVDAPGHETLMATMLSGASLMDGAILVI 115
                 D P                   R  + VD PGH   +  M++GA+ MDGAILV+
Sbjct: 70  -----YDTP------------------TRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 106

Query: 116 AASEECPQPQTKEHLMALDALGVEKIIIVQNKIDLVSEEAAVENYN-QIKEFTK--GTVA 172
           AA++  P PQT+EH++    +GV  II+  NK D+V +E  +E    +++E         
Sbjct: 107 AATDG-PMPQTREHILLGRQVGVPFIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPG 165

Query: 173 ENAPIIPVSAHHGANLDVLLKA--------IQDFIPTPERDETVSPKLYVARSFDVNKPG 224
           ++ PI+  SA      D   +A        +  +IP PER       L +   F ++   
Sbjct: 166 DDTPIVRGSALKALEGDAEWEAKIIELAGFLDSYIPEPERAIDKPFLLPIEDVFSISG-- 223

Query: 225 SEIKDLKGGVIGGSIIQGALKVGDELEIKPGIKVT 259
                 +G V+ G + +G +KVG+E+EI  GIK T
Sbjct: 224 ------RGTVVTGRVERGIIKVGEEVEI-VGIKET 251