Pairwise Alignments

Query, 410 a.a., translation initiation factor IF-2 subunit gamma from Methanococcus maripaludis S2

Subject, 614 a.a., selenocysteinyl-tRNA-specific translation factor from Escherichia coli BL21

 Score =  107 bits (268), Expect = 7e-28
 Identities = 107/400 (26%), Positives = 168/400 (42%), Gaps = 63/400 (15%)

Query: 11  IGMVGHVDHGKTSLTRKLTGVWTDTHSEELKRGISIRLGYADCEIKKCETCDEPECYTVG 70
           I   GHVDHGKT+L + +TGV  D   EE KRG++I LGYA           +P+    G
Sbjct: 3   IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYA--------YWPQPDGRVPG 54

Query: 71  KKCDSCGGKLQTLRKISFVDAPGHETLMATMLSGASLMDGAILVIAASEECPQPQTKEHL 130
                            F+D PGHE  ++ ML+G   +D A+LV+A  ++    QT+EHL
Sbjct: 55  -----------------FIDVPGHEKFLSNMLAGVGGIDHALLVVAC-DDGVMAQTREHL 96

Query: 131 MALDALGVEKIIIVQNKIDLVSEEAAVENYNQIKEFTKGTVAENAPIIPVSAHHGANLDV 190
             L   G   + +   K D V E    E   Q+KE  +      A +   +A  G  +D 
Sbjct: 97  AILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDA 156

Query: 191 LLKAIQDFIPTPERDETVSPKLYVARSFDVNKPGSEIKDLKGGVIGGSIIQGALKVGDEL 250
           L + +   +P  E     S +L + R+F V   G         V+ G+ + G +KVGD L
Sbjct: 157 LREHLLQ-LPEREHASQHSFRLAIDRAFTVKGAGL--------VVTGTALSGEVKVGDSL 207

Query: 251 EIKPGIKVTEGNKTHWVPIITKIISLGVGSKKLKTAYPGGLIGVGTELDPNLTKSDALSG 310
            +      T  NK        ++ +L   ++  +TA+ G  I +    D    + +    
Sbjct: 208 WL------TGVNKP------MRVRALHAQNQPTETAHAGQRIALNIAGDAEKEQINRGDW 255

Query: 311 SLAGIPGTLPETLEKMEIEPQLLERVVGSQDELVIEPLKTNEVLMLNVGTSTTVGVTVSA 370
            LA +P   PE   ++ +E Q               PL   + L ++   S   G     
Sbjct: 256 LLADVP---PEPFTRVIVELQ------------THTPLTQWQPLHIHHAASHVTGRVSLL 300

Query: 371 RPDRAEIKLKLPVCADKGDRVAISRKIGSRWRLIGYGIIL 410
             + AE+    P+     DR+ + R I +R  L G  +++
Sbjct: 301 EDNLAELVFDTPLWLVDNDRLVL-RDISARNTLAGARVVM 339