Pairwise Alignments

Query, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis S2

Subject, 415 a.a., diaminopimelate decarboxylase from Pseudomonas simiae WCS417

 Score =  280 bits (716), Expect = 6e-80
 Identities = 160/413 (38%), Positives = 251/413 (60%), Gaps = 16/413 (3%)

Query: 14  GNLKIDGHDASKLASTYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKAN 73
           G L  +G   S +A  +GTP YV S       +  + ++        G   ++ +A KAN
Sbjct: 9   GELFAEGVALSAIAQRFGTPTYVYSRAHIEAQYRSFTDALD------GVSHLVCYAVKAN 62

Query: 74  TNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRAF 133
           +NL V  +L++LG G DIVS GEL     +   +EKIVF+G  K +E+++  +E  +  F
Sbjct: 63  SNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCF 122

Query: 134 NVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALE 193
           N++S  EL  +   A EMG  A ++ RVNP+VDA THP ISTG+K+NKFG+ I    A +
Sbjct: 123 NIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAD--AED 180

Query: 194 TIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIRDVNLGGGL 253
               A ++ N++++G+ CHIGSQLT + PF++   +++  +  L   GI +  ++LGGG+
Sbjct: 181 VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV 240

Query: 254 GIPYDKNTKIPVQKDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKE 313
           G+ Y ++ + P+  D  KAV + I   EG+ +L  L+ EPGR +VA AGVLL  VE++K 
Sbjct: 241 GVRY-RDEEPPLIADYIKAVRERI---EGR-DL-TLMFEPGRYIVANAGVLLTQVEYLKH 294

Query: 314 TPVAKWVMIDAGMNDMMRPAIYESYHEITPCTIRA-EKEVVSVAGGLCESSDVFGKDREI 372
           T    + ++DA MND++RPA+Y+++  +T  T RA E     + G +CE+ D   KDR++
Sbjct: 295 TEHKDFAIVDAAMNDLIRPALYQAWMNVTAVTPRASEARAYDIVGPICETGDFLAKDRQL 354

Query: 373 SKMEVKDTVAILDVGAYGISMANNYNSRGKPAMILTNEKEVSLIRARETLADL 425
           + +E  D +AI   GAYG  M++NYN+RG+ A +L +  +   +R RET+A+L
Sbjct: 355 A-LEEGDLLAIHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAEL 406