Pairwise Alignments

Query, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis S2

Subject, 421 a.a., Diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingobium sp. HT1-2

 Score =  273 bits (698), Expect = 7e-78
 Identities = 158/421 (37%), Positives = 246/421 (58%), Gaps = 13/421 (3%)

Query: 14  GNLKIDGHDASKLASTYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKAN 73
           G + ++    +++A   GTP+YV S T T++   R+V  F+E   +     +I+FA KAN
Sbjct: 9   GTMHVEQVPMTEIAQQVGTPVYVYS-TATLE---RHVGVFREGLSQLDNP-LIAFAVKAN 63

Query: 74  TNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRAF 133
            N AV   L+KLG GAD+VS GEL  A  + +P+++IVF+G  K  EE+K+ +E  I  F
Sbjct: 64  PNAAVLATLAKLGLGADVVSGGELQRAVAAGIPADRIVFSGVGKTAEEMKLALELGIFQF 123

Query: 134 NVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALE 193
           N++S  E  +++E A  MG+ A VA+R+NP+VDA TH KISTG  +NKFG+  +   AL+
Sbjct: 124 NLESEPEAEMLSEVALSMGRKAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDR--ALD 181

Query: 194 TIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIRDVNLGGGL 253
           +   A  +  + + G+  HIGSQLT ++P      K+   +  L+  G  IR  +LGGGL
Sbjct: 182 SYAAARDLPGLDVQGVAVHIGSQLTDLAPLEAAFVKVGALIAQLRAAGHDIRTADLGGGL 241

Query: 254 GIPYDKNTKIPVQ-KDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVK 312
           G+PYD +  +P    D    V  V   ++ +     L+ EPGR +V  AGVLL  V  VK
Sbjct: 242 GVPYDPSQPLPPSPADYGAMVTRVTQGWDAR-----LMFEPGRVIVGNAGVLLSQVIRVK 296

Query: 313 ETPVAKWVMIDAGMNDMMRPAIYESYHEITPCTIRAEKEVVSVAGGLCESSDVFGKDREI 372
           +   A +V++DA MND+MRP++Y+++H+I        +   +V G +CE+ D F   R++
Sbjct: 297 QGAQAPFVIVDAAMNDLMRPSLYDAWHDIRAVAPDGNRIASNVVGPVCETGDTFAMGRDM 356

Query: 373 SKMEVKDTVAILDVGAYGISMANNYNSRGKPAMILTNEKEVSLIRARETLADLISKDIVP 432
             +   D +  +  GAYG +MA  YNSR     +L +  + +++RAR  +  LI+ D +P
Sbjct: 357 DVVAAGDLLTFMTAGAYGATMAGTYNSRSLTPEVLVSGDKWAVVRARPPIEALIAGDHIP 416

Query: 433 N 433
           +
Sbjct: 417 D 417