Pairwise Alignments

Query, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis S2

Subject, 410 a.a., Diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingobium sp. HT1-2

 Score =  103 bits (256), Expect = 1e-26
 Identities = 114/397 (28%), Positives = 171/397 (43%), Gaps = 38/397 (9%)

Query: 14  GNLKIDGHDASKLASTYG-TPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKA 72
           G L I G  A+ L    G TPL+V           R+ E+         K   + +A KA
Sbjct: 16  GMLLIGGCGAASLVDEAGDTPLFVYDMGIIEAQVRRFREAIP-------KRIDLHYAIKA 68

Query: 73  NTNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRA 132
           N    +   ++ L  G DI S GEL +A  + +   +I F G  K  +E++  I A I  
Sbjct: 69  NPYAPLLSRMAGLVDGFDIASGGELALALEAGMDPARISFAGPGKRNDELEAAIHAGI-T 127

Query: 133 FNVDSISELVLINETAKEMGKIANVAFRVNPNVDAK-THPKISTGMKKNKFGLDIESGIA 191
            N++S  E       A+ +GK+  +A RVNP+ D K +  ++  G K   FG+D +   A
Sbjct: 128 INLESEGEGARALTVAERLGKVPRLAVRVNPDFDLKGSGMRMGGGAK--PFGVDADRAAA 185

Query: 192 LETIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNE-GIKIRDVNLG 250
           L    +          G H   GSQ       +E     +D    L +  G     VNLG
Sbjct: 186 LARAMID---AGADWRGWHIFAGSQALDPMAIIETQAATIDLAARLSDAVGAAPPLVNLG 242

Query: 251 GGLGIPY---DKNTKI-PVQKDLS---KAVLDVIYEYEGKIELPNLILEPGRSLVATAGV 303
           GG GIPY   D+   I P+   L     A+ D++ +    IEL       GR LV  AG+
Sbjct: 243 GGFGIPYFPGDERLDIRPIGVALDTALNALPDILTDSAFAIEL-------GRWLVGEAGI 295

Query: 304 LLGTVEHVKETPVAKWVMIDAGMNDMMRPA------IYESYHEITPCTIRAE--KEVVSV 355
            L  V  VK++    +V++D G++  +  +      +  +Y          E   + V+V
Sbjct: 296 YLTRVVDVKQSQGESFVVVDGGLHHQLAASGNFGTVVRRNYPIAVANRFGREPTTQPVNV 355

Query: 356 AGGLCESSDVFGKDREISKMEVKDTVAILDVGAYGIS 392
            G LC   D  G+   +  ++V D +AI   GAYG S
Sbjct: 356 VGCLCTPIDRLGEKVALPPVDVGDFIAIFLAGAYGAS 392