Pairwise Alignments

Query, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis S2

Subject, 376 a.a., type III PLP-dependent enzyme from Magnetospirillum magneticum AMB-1

 Score =  107 bits (267), Expect = 6e-28
 Identities = 97/342 (28%), Positives = 161/342 (47%), Gaps = 26/342 (7%)

Query: 66  ISFAYKANTNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMG 125
           + +A KAN    + R+L++ G   D+ S GE+ +   +  P+E+I F    K + +I   
Sbjct: 42  VYYAVKANPAPEIVRMLTEEGSRFDVASRGEIDLCLANGAPAERISFGNTIKKQSDIAYA 101

Query: 126 IEAEIRAFNVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLD 185
               +R +  DS +EL  + E A      + V  R+    D    P         KFG +
Sbjct: 102 YAKGVRLYAFDSEAELEKLAEAAPG----SRVFCRILMTCDGAEWP------LSRKFGCE 151

Query: 186 IESGIALETIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIR 245
           I+  +A + +  A +M  +   G+  H+GSQ T +  +     K       L   GI++R
Sbjct: 152 ID--MAKDLLVKAREM-GLDPYGVSFHVGSQQTDLRQWDIAVGKAAMLFSALDAAGIELR 208

Query: 246 DVNLGGGLGIPYDKNTKIPVQKDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLL 305
            VNLGGG    Y K  ++   +  ++AV+D + ++ G   +P++I+EPGRSLV  AG+L 
Sbjct: 209 MVNLGGGFPARYRK--EVDGLERYAEAVMDAMTKHFGN-NIPSMIIEPGRSLVGDAGILE 265

Query: 306 GTVEHVKETPV---AKWVMIDAGMNDMMRPAIYESY-HEITPCTIRAEKEVVSVAGGLCE 361
             V  +         +WV +D G    +   + E+  + I       +   V +AG  C+
Sbjct: 266 TEVVLISRKGYDDDVRWVYLDVGKFGGLAETMDEAIKYRIVTTRDGDDTAPVVLAGPTCD 325

Query: 362 SSDVF----GKDREISKMEVKDTVAILDVGAYGIS-MANNYN 398
           S+D+     G +  +S ++V D V IL  GAY  S  A N+N
Sbjct: 326 SADILYEKAGYEMPLS-LKVGDKVRILSTGAYTTSYSAVNFN 366