Pairwise Alignments

Query, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis S2

Subject, 447 a.a., type III PLP-dependent enzyme from Dickeya dianthicola ME23

 Score =  144 bits (363), Expect = 6e-39
 Identities = 105/412 (25%), Positives = 199/412 (48%), Gaps = 20/412 (4%)

Query: 26  LASTYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKANTNLAVTRLLSKL 85
           +A   GTP YV S  Q  +         ++  ++      + ++ KAN NL+V R+L++ 
Sbjct: 36  IAGRIGTPFYVYSARQLRRQL-------QQLRQQLPTGIAVYYSLKANPNLSVVRVLAEQ 88

Query: 86  GCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRAFNVDSISELVLIN 145
           G G ++ S  EL  A  + V  + I++ G  K    +K  I+  IRA  V+S++EL  +N
Sbjct: 89  GAGCEVCSPTELKTALAAGVSPQHILYVGPGKSLPALKFAIDCGIRAIVVESVAELDNLN 148

Query: 146 ETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALETIKMA-EKMENV 204
           + A +   +  VA R+NP+  +  H ++    K  +FG+ +++   L+T+  +  +  +V
Sbjct: 149 QLAAQANTVQTVALRINPDF-SSAHARLVMSGKPTQFGMTLDT---LDTVLTSLHRWPSV 204

Query: 205 KIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKN-EGIKIRDVNLGGGLGIPYDKNTKI 263
            + G H ++G+++       +  R I+   + L++   + +  V++GGG G+PY      
Sbjct: 205 SLRGFHIYLGTRILNAQTIADNTRNILQLALNLRDTHQLTLDFVDVGGGFGVPYFPKEAP 264

Query: 264 PVQKDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKETPVAKWVMID 323
                L +AV  ++ ++  +     +I+E GR LVA AG+ +  V  +K      + + D
Sbjct: 265 LDLPALGEAVASIVADFLRQTADTQIIIELGRYLVAEAGLFVTRVNTLKTAGGKTFAVCD 324

Query: 324 AGMNDMMRPAIYESYHEITPCTIRAEKEV------VSVAGGLCESSDVFGKDREISKMEV 377
            G N     A   S        +R    V        V+G LC  +D+ G +  +  + V
Sbjct: 325 GGANCHSAAAGLNSMLRKNFPLLRLGDNVDRPLQPYQVSGPLCTPTDLLGDNVLLPMLAV 384

Query: 378 KDTVAILDVGAYGISMA-NNYNSRGKPAMILTNEKEVSLIRARETLADLISK 428
            D + I   GAYG++ +  ++ S G P  ++ + + ++LIR  ET   L+++
Sbjct: 385 DDLIGIPHSGAYGLTASPGSFLSFGYPPEVMVDGRRLTLIRQPETTEQLLAR 436