Pairwise Alignments

Query, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 289 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  213 bits (541), Expect = 5e-60
 Identities = 114/251 (45%), Positives = 159/251 (63%), Gaps = 5/251 (1%)

Query: 4   LELKNLIKKFGNGK-KDLVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSSG 62
           +EL N+ ++F     K + A+ + ++SV+  EF  +VGP+GCGKST L ++ GL  PS+G
Sbjct: 27  IELDNVTRRFLTPDGKSMTALRDFNMSVDRGEFACVVGPTGCGKSTTLNLVTGLAKPSAG 86

Query: 63  GIYLDEKEVLGPDADRGMVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKKFIKMV 122
            + +  + V G   D G VFQ   L PW++VL NV  G   + +PK Q  E A+ +I  V
Sbjct: 87  EVRVMGQPVNGIHKDVGFVFQADALFPWRSVLDNVAAGPLYRGLPKAQAYEKARDWIARV 146

Query: 123 GLEEFCDSYPYELSGGMQQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHLLKIWQ 182
           GL  F   YP++LSGGM++RVA+A+T  N PKI+LMDEPF ALD QTR  +QD LL +W 
Sbjct: 147 GLARFESHYPHQLSGGMRKRVALAQTFINEPKILLMDEPFSALDVQTRTNMQDELLSLWS 206

Query: 183 TEKKTVVFVTHSVDEAVYLSDRVVVMTARPGKIKSIIDIDLDRPRK----RTSPEFTKYK 238
               +VVFVTH ++EAV L+D+V V+TA P  +KS+  IDL RPR     R    F +  
Sbjct: 207 GSGASVVFVTHDLEEAVALADKVYVLTAGPATVKSVYTIDLPRPRVMAEIRYDAAFVERC 266

Query: 239 KMIIDELKSEV 249
           + I D+L+ EV
Sbjct: 267 RTIWDDLREEV 277