Pairwise Alignments

Query, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 274 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  216 bits (549), Expect = 5e-61
 Identities = 107/242 (44%), Positives = 159/242 (65%), Gaps = 3/242 (1%)

Query: 3   VLELKNLIKKFGNGKKDLVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSSG 62
           +++++ L K +     ++ ++  +DL ++  EF+ +VGPSGCGKST+L+++AGL   S+G
Sbjct: 22  LIDIRGLAKTYQTRDGEVPSLKPMDLDISEGEFICVVGPSGCGKSTLLKLVAGLIPASAG 81

Query: 63  GIYLDEKEVLGPDADRGMVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKKFIKMV 122
            I +D K V  P  D G+VFQ   LL W+TVL+NV   +E++++ +   +E A++ +   
Sbjct: 82  EILIDGKAVTEPPDDVGIVFQSPVLLAWRTVLRNVMLPVEVRRLDRASHLERARQLLNTA 141

Query: 123 GLEEFCDSYPYELSGGMQQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHLLKIWQ 182
           GL  F + YP++LSGGMQQR AI R L ++PKIVLMDEPFGALD  TR  +   L +I  
Sbjct: 142 GLNGFENKYPWQLSGGMQQRAAICRALVHDPKIVLMDEPFGALDAMTREKMNLELQRIQY 201

Query: 183 TEKKTVVFVTHSVDEAVYLSDRVVVMTARPGKIKSIIDIDLDRPR---KRTSPEFTKYKK 239
              KT++ +THS+ EA++L+DRVVVMT RPG + +I D+ L RPR      SP F +  K
Sbjct: 202 ETGKTILLITHSIPEAIFLADRVVVMTDRPGSVAAIYDVPLPRPRALDMMASPIFAELAK 261

Query: 240 MI 241
            I
Sbjct: 262 TI 263