Pairwise Alignments

Query, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 270 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  197 bits (501), Expect = 2e-55
 Identities = 106/237 (44%), Positives = 147/237 (62%), Gaps = 4/237 (1%)

Query: 21  VAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSSGGIYLDEKEVLGPDADRGM 80
           VAV  V+L V   EFV+IVGP+GCGKST+L   AGL  P+SG + +    + G +   G 
Sbjct: 27  VAVHGVNLDVADGEFVAIVGPTGCGKSTLLNATAGLLKPASGTVTIHGTPLAGLNRAAGY 86

Query: 81  VFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKKFIKMVGLEEFCDSYPYELSGGMQ 140
           +FQ   L PWKT L NV  GLE+     ++    A+K++  VGL  F D YP++LSGG +
Sbjct: 87  LFQAEALFPWKTALDNVAIGLEVAGTDTDEARARARKWLARVGLAAFADRYPHQLSGGQR 146

Query: 141 QRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHLLKIWQTEKKTVVFVTHSVDEAVY 200
           +RV +A+ L  +PKI+LMDEPFG LD QTR ++ + LL +W  ++K V+FVTH ++EA+ 
Sbjct: 147 KRVGLAQVLIRDPKILLMDEPFGPLDAQTRQIMGNLLLDLWSQDRKAVMFVTHDLEEAIS 206

Query: 201 LSDRVVVMTARP-GKIKSIIDIDLDRPRK---RTSPEFTKYKKMIIDELKSEVLKSY 253
           L+DRVV+M A P  +I     + + RPR    R  P F    + I   LK EV+K Y
Sbjct: 207 LADRVVIMGAGPASRIIGQWRVPIPRPRDIDVRLEPAFHHLHREIWAALKDEVVKGY 263