Pairwise Alignments

Query, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 277 a.a., Nitrate import ATP-binding protein NrtD from Xanthobacter sp. DMC5

 Score =  219 bits (559), Expect = 4e-62
 Identities = 114/242 (47%), Positives = 154/242 (63%), Gaps = 3/242 (1%)

Query: 15  NGKKDLVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSSGGIYLDEKEVLGP 74
           +G + + AVD V   V   EF+ ++GPSGCGKST+L  +AG ETP  G + +  K V GP
Sbjct: 30  DGGELVPAVDRVSFQVRRGEFICLLGPSGCGKSTLLNAVAGFETPYEGEVVVGTKVVTGP 89

Query: 75  DADRGMVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKKFIKMVGLEEFCDSYPYE 134
             DRG+VFQQ  L PWK+V  NV  G  +    +     IA + I+MVGL     + P+ 
Sbjct: 90  GPDRGVVFQQPRLFPWKSVRANVAHGPRMAGKSRADAGAIADELIEMVGLSRSAKALPHT 149

Query: 135 LSGGMQQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHLLKIWQTEKKTVVFVTHS 194
           LSGGMQQRVAIAR LAN P I+LMDEPFGALD QTR V+Q+ LL++W     T++FVTH 
Sbjct: 150 LSGGMQQRVAIARALANRPNILLMDEPFGALDAQTRTVMQEGLLRLWAQLDTTILFVTHD 209

Query: 195 VDEAVYLSDRVVVMTARPGKIKSIIDIDLDRPR---KRTSPEFTKYKKMIIDELKSEVLK 251
           +DEAV L+DRV+VM+A PG+I   + +DL RPR         F   ++  +D ++ +  K
Sbjct: 210 IDEAVLLADRVLVMSAGPGRIVRDLAVDLPRPRTVETTLGARFQALRRECLDLIRQQSQK 269

Query: 252 SY 253
           ++
Sbjct: 270 AF 271