Pairwise Alignments

Query, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 267 a.a., ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  201 bits (511), Expect = 1e-56
 Identities = 99/232 (42%), Positives = 154/232 (66%), Gaps = 9/232 (3%)

Query: 20  LVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSSGGIYLDEKEVLGPDADRG 79
           L  +D +DL V   EFV+++GPSGCGKST+LR++AGLE  ++G I  D + +  PD  R 
Sbjct: 37  LQVLDGIDLQVRPGEFVALLGPSGCGKSTLLRLVAGLEPATTGSITQDGEPITRPDPSRI 96

Query: 80  MVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKKFIKMVGLEEFCDSYPYELSGGM 139
           +VFQ  TL PW++V  NV  GL+ + + K QR  + +  +++VGL +F  ++P++LSGGM
Sbjct: 97  VVFQDPTLYPWRSVWDNVALGLQARGVLKAQRGRVDEA-LRLVGLTDFAKAFPHQLSGGM 155

Query: 140 QQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHLLKIWQTEKKTVVFVTHSVDEAV 199
            QRVA+AR L N+P+++++DEP G LD+ TR  +Q  L+ +WQ    + + VTH V+EA+
Sbjct: 156 AQRVALARALVNDPQLLVLDEPLGKLDSLTRIAMQSELVNLWQRAGFSALLVTHDVEEAL 215

Query: 200 YLSDRVVVMTARPGKIKSIIDIDLDRPRKRTSPEFTKYKKMIIDELKSEVLK 251
           +L++RV+V++ RP +I + + +DL  PR R  P         + EL+ E LK
Sbjct: 216 FLANRVIVLSDRPARIAAELVVDLPYPRHRGDPR--------LAELRHEALK 259