Pairwise Alignments

Query, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 267 a.a., ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  198 bits (503), Expect = 1e-55
 Identities = 107/243 (44%), Positives = 152/243 (62%), Gaps = 11/243 (4%)

Query: 3   VLELKNLIKKFGNGKKDLVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSSG 62
           ++ L+N+ K+F NG    +A+  + L +  ++F+S +GPSGCGKST LR+IAGL   SSG
Sbjct: 9   LVSLRNVGKRFANGT---LALQGMSLDIGEHDFISFLGPSGCGKSTALRLIAGLTRLSSG 65

Query: 63  -----GIYLDEKEVLGPDADRGMVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKK 117
                G      +    D D G VFQ+ TL+PW  V  NV   L++    ++    + ++
Sbjct: 66  EMSWSGANTGSAKDSKSDRDLGFVFQEPTLMPWAKVFDNVWLPLKLAGTSRDAAAPVVQQ 125

Query: 118 FIKMVGLEEFCDSYPYELSGGMQQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHL 177
            +++VGL  F D YP ELSGGM+ RV+IAR L  +P+++LMDEPF ALD  TR  L + L
Sbjct: 126 VLELVGLSRFADVYPRELSGGMKMRVSIARALVTHPRLLLMDEPFAALDEMTRIKLNNDL 185

Query: 178 LKIWQTEKKTVVFVTHSVDEAVYLSDRVVVMTARPGKIKSIIDIDLDRPRK---RTSPEF 234
           L IW+  + ++VFVTHSV E+VYLS+R+VVM ARPG++   I ID   PR    RTS  +
Sbjct: 186 LAIWREHRFSIVFVTHSVYESVYLSNRIVVMAARPGRVIDEIRIDEPYPRGEEFRTSSRY 245

Query: 235 TKY 237
             +
Sbjct: 246 NAH 248