Pairwise Alignments

Query, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 268 a.a., ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  211 bits (536), Expect = 2e-59
 Identities = 110/247 (44%), Positives = 164/247 (66%), Gaps = 11/247 (4%)

Query: 2   SVLELKNLIKKFGNGKKDLVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSS 61
           + + ++ + K F + ++ + A++ VD SV   EFVSI+GPSGCGKST+LRM+AGL  P +
Sbjct: 18  AAISVRGVAKTF-DARQGVRALEQVDFSVPRGEFVSILGPSGCGKSTLLRMVAGLIQPDA 76

Query: 62  GGIYLDEKEVLGPDA-----DRGMVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAK 116
           GG    +  VLG        D G+VFQ + +LPW+TV  N+    E++K+PK+   E  +
Sbjct: 77  GG----DVRVLGHSQTQMSDDVGVVFQTHNMLPWETVEANIRLAAEVRKLPKKDIDERVE 132

Query: 117 KFIKMVGLEEFCDSYPYELSGGMQQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDH 176
             + ++ LE+F  +YP+ELSGGM+QR A+ + L   PK++L+DEPFGALD  TR  L   
Sbjct: 133 ALLPILKLEKFRRNYPHELSGGMRQRAALGQILVMRPKVLLLDEPFGALDALTRDQLNVE 192

Query: 177 LLKIWQTEKKTVVFVTHSVDEAVYLSDRVVVMTARPGKIKSIIDIDLDRPR-KRTSPEFT 235
           LL++WQ  ++TV+ +THS+ EAV+LSDRV+VM+ RPG++   I IDL RPR  RT+ E  
Sbjct: 193 LLRLWQEMRQTVILITHSISEAVFLSDRVLVMSERPGRVIEDIRIDLPRPRDPRTTKEAA 252

Query: 236 KYKKMII 242
            +   ++
Sbjct: 253 AFGHYVV 259