Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 275 a.a., Bicarbonate transport system permease protein CmpB from Xanthobacter sp. DMC5

 Score =  124 bits (311), Expect = 2e-33
 Identities = 66/200 (33%), Positives = 118/200 (59%), Gaps = 1/200 (0%)

Query: 46  GILGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPL 105
           G+L   +L  +  VS++R+ IG   A A  +PLGL +G +  +        + LR I PL
Sbjct: 76  GLLLHSDLPIHVYVSLQRIFIGLGFALAIGVPLGLAVGTFGALEAATTPAFQFLRMISPL 135

Query: 106 AWVPLALAWFGIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILK 165
           +W+PLA+  FG+G+  ++F++   A +PIL++T +GV+ +    +  A++L  +  ++L 
Sbjct: 136 SWMPLAVMVFGVGDRPIYFLLAFAAVWPILLSTAAGVRQLDPRWLLLARSLAATRWEMLS 195

Query: 166 SVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMI 225
            V++P  +  ILTG+R+  GI W+ +V  EML G  AGLGY I+        + ++A ++
Sbjct: 196 RVILPGVTGHILTGVRLAIGILWIVLVPCEML-GVSAGLGYFILDTRDRLAYSELMAMVL 254

Query: 226 IIGIIGIILDKGLRYIEKKY 245
           +IG++G  LD   R + +++
Sbjct: 255 LIGVLGFALDALARALCRRW 274