Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 293 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  127 bits (319), Expect = 3e-34
 Identities = 75/249 (30%), Positives = 131/249 (52%), Gaps = 6/249 (2%)

Query: 3   ILKNLTLPIIGILAWE-ALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSI 61
           +L  L+ P   ++AW  A  + L    ILP   ++   + +    ++  G+L  +  VS 
Sbjct: 44  VLLGLSFPFALLVAWWWAARLGLVPEQILPAPATIYETVSS----LIADGSLTTHLEVST 99

Query: 62  KRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESS 121
            RVL+GF +   F +  G   G    +       V+ +  +  LAW+PL   + GI E  
Sbjct: 100 HRVLVGFGLGALFGLVFGAAAGLSPTVRAFLYPPVQAVARVNVLAWMPLLTLFMGIDEPL 159

Query: 122 MHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLR 181
            + +I   A  PI++ T  G+++V   + E  + L  +T+D L+ VV+P + P I  GLR
Sbjct: 160 KYVVIGWSAAIPIILGTARGIENVSPAVRELGRVLHFNTRDTLRLVVLPGAVPSIFAGLR 219

Query: 182 VGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYI 241
            G   AW  +V AE+   S  GLGYL+ +   L ++++V+ +MI++ + G+ +D GLR++
Sbjct: 220 EGLANAWQTLVLAELF-ASFEGLGYLMTWGRQLFQLDLVIIAMIVVALAGLAMDLGLRWV 278

Query: 242 EKKYFCWKK 250
           E++   WK+
Sbjct: 279 ERRAQPWKR 287