Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 253 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  137 bits (345), Expect = 2e-37
 Identities = 78/226 (34%), Positives = 130/226 (57%), Gaps = 6/226 (2%)

Query: 15  LAW-EALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGA 73
           LAW  A A  +  P+ LP   SV++ L      +   G L  +  VS+ R+LIGF +A A
Sbjct: 19  LAWLVAAAAGVVRPIFLPSPASVVAQLAK----LAADGTLWTDMGVSVYRILIGFLLASA 74

Query: 74  FAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFIGAFFP 133
            AIPLGLL+G Y       +  V+ +R +P +A+VPL++ W G G++    II+IG FF 
Sbjct: 75  MAIPLGLLVGSYLTWEAAVEPLVDFVRYMPVVAFVPLSILWVGTGDAQKFLIIWIGTFFQ 134

Query: 134 ILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVA 193
            ++  +  VK VP   I   +TLG S + I+  +++P++ P I   LR+  G AW  +V 
Sbjct: 135 QVLLVMDVVKRVPPDFIGLGRTLGLSDRKIITRIILPSAMPGIWDTLRITLGWAWTWLVV 194

Query: 194 AEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLR 239
           AE++  + +GLGY I+ A    + N +   ++++G++G++ D+ ++
Sbjct: 195 AELV-AATSGLGYRIVVAQRFFQTNTIFGYILLLGVLGLVTDQAMK 239