Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 293 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  148 bits (374), Expect = 1e-40
 Identities = 81/240 (33%), Positives = 135/240 (56%), Gaps = 9/240 (3%)

Query: 12  IGILA-WEALAI--YLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGF 68
           +G+LA W+A A   +L++ V+    +  ++         LG G+L+ N  VS +R LIG 
Sbjct: 48  LGVLALWQAAASLGFLSSRVLPAPSDVAVAFWRT-----LGDGSLLANVAVSTRRALIGL 102

Query: 69  FIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFI 128
            I G+    LG+L G        FD+T+++LR +P LA +PL + WFGIGE +  F++ I
Sbjct: 103 AIGGSIGFALGVLNGIVRPAETAFDSTMQMLRNVPHLAIIPLVILWFGIGEEAKIFLVAI 162

Query: 129 GAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAW 188
           G  FPI +NT  G+++V   ++E A+  G S+  +   +V+P + P +L GLR   GI W
Sbjct: 163 GVAFPIYLNTFHGIRTVDRGLVEMARVYGLSSTALFWRIVLPGALPSVLVGLRYALGIMW 222

Query: 189 MCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFCW 248
           + ++ AE +  S  G+GY+ M A    + ++VV  ++   ++G + D   R IE++   W
Sbjct: 223 LTLIVAETI-SSTEGIGYMTMNAREFLQTDVVVLGVLAYALLGKLADSFTRAIERRALAW 281