Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 273 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  169 bits (429), Expect = 4e-47
 Identities = 92/260 (35%), Positives = 156/260 (60%), Gaps = 15/260 (5%)

Query: 5   KNLTLPIIGILAWE-ALAIYLNNPVILPKVESVIS------ILLNP-------GVGILGT 50
           + L +P+  +L W+ A +    NP++LP   +V +        L P        +  + +
Sbjct: 11  EGLLVPVAVVLLWQIACSAGWVNPMVLPSPAAVAARWWSYLAPLEPFDPATESKIAWIFS 70

Query: 51  GNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPL 110
           G LI +++ S+ RV++GF +    A+PLGL MG    I    +  +++LRPIPP+A++PL
Sbjct: 71  GELIHDSLASLSRVVMGFVVGAGLALPLGLFMGTSDSIYRYVNPLMQVLRPIPPIAYIPL 130

Query: 111 ALAWFGIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVP 170
           ++ WFG+G +   F+I IGAFFP+L+NTI+GV+ V  I I AA++LG S   I + V++P
Sbjct: 131 SILWFGLGNAPAVFLIAIGAFFPVLMNTIAGVRHVDSIYIRAARSLGASRLTIFRRVILP 190

Query: 171 ASSPDILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGII 230
           A++P IL+G R+G G A++ V+ AEM+  ++ GLG+ I+ A      + ++A M+ IG+I
Sbjct: 191 AATPYILSGARIGIGTAFIVVIVAEMIAVNN-GLGFRILEAREYFWSDKIIAGMLTIGLI 249

Query: 231 GIILDKGLRYIEKKYFCWKK 250
           G+ +D  +  +      W +
Sbjct: 250 GLAIDLAVSRLNNHLLRWHR 269