Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 280 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  139 bits (349), Expect = 8e-38
 Identities = 83/249 (33%), Positives = 136/249 (54%), Gaps = 3/249 (1%)

Query: 2   KILKNLTLPIIGILAWEALAIYLNNPVILPKVESVISILLNPG-VGILGTGNLIENTIVS 60
           ++L  LT   +  L W A      NP+ LP  ++V    +    VG  G+  L E+ I S
Sbjct: 32  RLLTTLTAASLFALWWLAAHYAWVNPLFLPSPKAVWDAFVRTATVGYQGS-LLHEHLIAS 90

Query: 61  IKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGES 120
           + RVL G+ +A    IPLG++MG    +  +FD  +E  RP+PPLA   L + W GIG++
Sbjct: 91  LYRVLAGYALACLVGIPLGIVMGLSRDVKAVFDPVIEFYRPLPPLALYTLIVMWLGIGDA 150

Query: 121 SMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGL 180
           S   I+F+ A  P+ I+++    SV    ++AAK+LG  ++ + + V +PA  P I TG+
Sbjct: 151 SKVAILFLAALPPLTISSMHAAASVDPRYVKAAKSLGADSRQLFRHVFLPACMPGICTGM 210

Query: 181 RVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRY 240
           R+  G  +  +VAAE++  + AGLG++I  A      +IV+  + ++   G+ LD  +R 
Sbjct: 211 RISLGFTYTVLVAAEIV-AATAGLGWMIWDASKFLLGDIVIMGLFVLAFTGMALDFLIRL 269

Query: 241 IEKKYFCWK 249
            E+    W+
Sbjct: 270 AERALTPWR 278