Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 243 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  127 bits (318), Expect = 3e-34
 Identities = 72/244 (29%), Positives = 131/244 (53%), Gaps = 7/244 (2%)

Query: 7   LTLPIIGILAWEALA-IYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVL 65
           +++P+  ++ W+ +A   + NP++ P    V    L      + +G  +E+ + S+KRV 
Sbjct: 6   VSIPLF-LMVWQLIAQARIVNPILFPAPTEVARAALE----WVTSGLFVEDAVASLKRVA 60

Query: 66  IGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFI 125
            G+ +     +  GLL G  +  + L     ++LRPIPP+A+V + + WFG+ E    F+
Sbjct: 61  TGYLVGSVVGVGCGLLTGRSAFFSGLLGPLFQVLRPIPPIAFVSIVILWFGLSEGGKVFL 120

Query: 126 IFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAG 185
           I  G FF + ++T  GV+ V   ++ AA+ LG   + ++  VV+ ++ P I+ GLR   G
Sbjct: 121 IVWGVFFTVWLSTHLGVQKVDQGLVRAAQMLGTPRRRLVGEVVLLSALPFIVVGLRTAVG 180

Query: 186 IAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKY 245
           I++  +VAAE L G+ AG+ Y I  A    +  +V A +  +G+I  I D+    + ++ 
Sbjct: 181 ISFYTLVAAE-LAGAFAGIFYRIQLAQQNMQTGLVFAGLAALGLISFIADRCFAMLAQRL 239

Query: 246 FCWK 249
             W+
Sbjct: 240 VWWR 243