Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 281 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  166 bits (420), Expect = 5e-46
 Identities = 86/233 (36%), Positives = 137/233 (58%), Gaps = 6/233 (2%)

Query: 17  WEALA-IYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGAFA 75
           W+A+  + L +  +LP   +V   L    V     G+L  +   S++RV +GF +A    
Sbjct: 48  WQAVTGLGLVDGFLLPSPFAVAQALWEMAVD----GSLWIHLAASLQRVAVGFLLACVVG 103

Query: 76  IPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFIGAFFPIL 135
           + LGL+ G++  ++D     VE LRPIPPLAW+P+ + WFG+G+++ +F++F+GA FP  
Sbjct: 104 LALGLVCGWWRSVSDFVRPVVEALRPIPPLAWIPITILWFGLGDAASYFLVFLGAVFPAF 163

Query: 136 INTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAE 195
           + T + V+ +    + AA  LG     +   V++PAS P IL GLR+  G+ WMCVV AE
Sbjct: 164 VATYTAVRGLDRNQMNAALCLGAKPWQLFWDVLIPASLPIILPGLRIALGVGWMCVVTAE 223

Query: 196 MLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFCW 248
           ++  +  GLGYLI  +  L ++N VVA M+ IG++G  +   L  IE++   W
Sbjct: 224 LI-AAQTGLGYLIQQSRMLFQINNVVAGMVTIGLVGFAMSAILERIERRVNAW 275