Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 273 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  141 bits (355), Expect = 2e-38
 Identities = 82/246 (33%), Positives = 135/246 (54%), Gaps = 5/246 (2%)

Query: 4   LKNLTLPIIGILAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKR 63
           LK L LP++ +L  E +      P       S I++ L      L  G+L ++   S+ R
Sbjct: 25  LKGLVLPVLILLVLEVVVRVGWLPSYQMPAPSEIAVTLTD----LAEGSLWKHISASLGR 80

Query: 64  VLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMH 123
           VL+GF I  + A+     +G         + T   LR IP LAWVPL L W GI E+S  
Sbjct: 81  VLLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIDETSKI 140

Query: 124 FIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVG 183
            +I IGAFFP+ +N ++ ++ +   ++E  +  G S   +++ +++PA+ P + TGLR G
Sbjct: 141 VLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFSRWRLVRRILLPAALPGLFTGLRSG 200

Query: 184 AGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEK 243
             +AWM +VAAE++  +  GLGYL+      S+ +IV+A++I++  +G + D  L  +EK
Sbjct: 201 LSLAWMFLVAAELI-AATKGLGYLLSDGRETSRPDIVLAAIIVLASLGKVSDGLLATLEK 259

Query: 244 KYFCWK 249
           +   W+
Sbjct: 260 RCLAWR 265