Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  145 bits (366), Expect = 8e-40
 Identities = 74/186 (39%), Positives = 113/186 (60%), Gaps = 1/186 (0%)

Query: 47  ILGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLA 106
           +L +  L+ +   S+ RV  G+  A    + LGLL+G      D     +E+LRPIP +A
Sbjct: 53  LLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVA 112

Query: 107 WVPLALAWFGIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKS 166
           W+PLA+  F   E SM FI F GA FPIL+NT+ GV++V   ++ +A++LG     IL+ 
Sbjct: 113 WIPLAILMFPSSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILRE 172

Query: 167 VVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMII 226
           VV+P + P I+TGL +G G +W C+V AEM+ G   G+GY    +Y+L     +V  M++
Sbjct: 173 VVLPGALPSIVTGLAIGMGTSWFCLVTAEMISG-QFGIGYYTWESYTLQNYPDIVVGMLL 231

Query: 227 IGIIGI 232
           IG++G+
Sbjct: 232 IGVLGM 237