Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 292 a.a., nitrate ABC transporter, permease protein from Enterobacter asburiae PDN3

 Score =  152 bits (383), Expect = 1e-41
 Identities = 82/242 (33%), Positives = 145/242 (59%), Gaps = 10/242 (4%)

Query: 14  ILAWEALAIYLNN-PVILPKVESVISILLNP----GVGILGTGNLIENTIVSIKRVLIGF 68
           ++ W+  AI     P+ L  ++S I++  +P    G   +G G    N + S++RV +GF
Sbjct: 55  VVLWQLAAINSKGFPMPLSTLDSAITLFADPFYRDGPNDMGIG---WNVLASLQRVAVGF 111

Query: 69  FIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFI 128
            +A    IPLG L+G ++  + +F   + LLRP+ PLAW+P+ L  F   E +  + IFI
Sbjct: 112 GLAALAGIPLGFLIGRFTFFSRMFGPLIALLRPVSPLAWLPIGLLLFQKAEPASSWTIFI 171

Query: 129 GAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAW 188
            + +P++INT  GV+ +P   +  A+ L  S   I++ ++ PA  P +LTG+R+  GIAW
Sbjct: 172 CSIWPMVINTAEGVRRIPQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAW 231

Query: 189 MCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFCW 248
           + +VAAEML G   G+G+ I   ++   +  ++ +++IIG++G++L++GL  I ++ F W
Sbjct: 232 LVIVAAEMLTGG-LGIGFWIWNEWNNLNVENILIAIVIIGVVGLLLEQGLMLIARR-FSW 289

Query: 249 KK 250
           ++
Sbjct: 290 QE 291