Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 263 a.a., aliphatic sulfonate ABC transporter permease SsuC from Dickeya dianthicola ME23

 Score =  134 bits (337), Expect = 2e-36
 Identities = 72/241 (29%), Positives = 135/241 (56%), Gaps = 6/241 (2%)

Query: 9   LPIIGILAWE-ALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIG 67
           LP++ +  W+ A ++   +  ILP  ++V          +  +G L ++  +S  R L G
Sbjct: 17  LPLLLVAVWQLASSVGWLSSRILPSPQAVAVTFWR----LTRSGELWQHLSISTWRALTG 72

Query: 68  FFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIF 127
           F I GA  + LG + G       L DT+V++LR +P LA +PL + WFGI ES+  F++ 
Sbjct: 73  FAIGGALGLALGFITGLSRTGERLLDTSVQMLRNVPHLALIPLVILWFGIEESAKIFLVA 132

Query: 128 IGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIA 187
           +G  FP+ +NT  G++++   ++E +++ G S   + + V++P + P I+ G+R   G+ 
Sbjct: 133 LGTLFPVYLNTYHGIRNIDGGLLEMSRSYGLSGFRLFREVLLPGALPSIMVGVRFSLGLM 192

Query: 188 WMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFC 247
           W+ ++ AE +  S +G+GYL M A    + ++VV ++I+  ++G + D     +E+ +  
Sbjct: 193 WLTLIVAETISAS-SGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVIALALERIWLR 251

Query: 248 W 248
           W
Sbjct: 252 W 252