Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 266 a.a., ABC transporter, membrane spanning protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score =  136 bits (342), Expect = 5e-37
 Identities = 76/240 (31%), Positives = 130/240 (54%), Gaps = 6/240 (2%)

Query: 10  PIIGILAWE-ALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGF 68
           P+I ++ W+ A +  L +  ILP   +V    L     +  +G L+++   S  R  +GF
Sbjct: 26  PVIVVILWQIASSGGLLSQGILPSPLAV----LEAAWSLAASGELVQHMAASFWRAAVGF 81

Query: 69  FIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFI 128
            I  A  +  G + G +     LFD+++++LR IP LA VPL + WFGIGE +  F++  
Sbjct: 82  GIGSALGLFFGFVNGLWRTGETLFDSSLQMLRNIPSLAMVPLVIMWFGIGEEAKIFLVAF 141

Query: 129 GAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAW 188
              FPI +NT  G+KSV   +IE  +  G +   +++ V++P +   IL G+R   G+AW
Sbjct: 142 ATMFPIYLNTFHGIKSVDQGLIEMGRNYGLTRTGLVRDVILPGAMSSILVGVRYALGVAW 201

Query: 189 MCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFCW 248
           + ++ AE +  S +G+G L   A    + ++VV S+I+  ++G + D   R  E ++  W
Sbjct: 202 IVLIVAETIAAS-SGIGLLATNAREFLQSDVVVLSIILYALLGKLTDWLARLAENRWLRW 260