Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 260 a.a., aliphatic sulfonate ABC transporter permease from Agrobacterium fabrum C58

 Score =  152 bits (384), Expect = 7e-42
 Identities = 85/246 (34%), Positives = 132/246 (53%), Gaps = 6/246 (2%)

Query: 9   LPIIGILAWEALA-IYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIG 67
           LP + +  WE  A + L +  +LP   +V          +L +G LI N  VS  R L G
Sbjct: 18  LPALILAGWEVAARVGLISANVLPAPSAVAEAFWR----LLLSGELIANIGVSSARALAG 73

Query: 68  FFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIF 127
           F I G+     GL  G         DTT++++R IP LA +PL + WFGI E +  F++ 
Sbjct: 74  FAIGGSIGFIFGLANGLSRFSRSFTDTTLQMIRNIPHLALIPLVILWFGIDEEAKLFLVA 133

Query: 128 IGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIA 187
           +G FFPI INT+ G++ V   ++E  +T G S   + + V++P + P I TGLR   GI 
Sbjct: 134 LGVFFPIYINTLLGIQGVDPQLVEMGRTYGMSPFTLFRRVILPGALPSIFTGLRYALGIM 193

Query: 188 WMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFC 247
           W+ ++ AE +  S +GLGY+ M A     +++VV S++I  ++G + D   R++E  +  
Sbjct: 194 WLTLIVAETI-SSSSGLGYMAMQAREFLLIDVVVLSILIYALLGKLADSFARFLESIFLQ 252

Query: 248 WKKMMK 253
           W    K
Sbjct: 253 WHPAFK 258