Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 268 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Acinetobacter radioresistens SK82

 Score =  146 bits (369), Expect = 4e-40
 Identities = 78/241 (32%), Positives = 140/241 (58%), Gaps = 6/241 (2%)

Query: 9   LPIIGILAWEALAIY-LNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIG 67
           +P++ ++ W+  ++  L    ILP   +V++   +    +L +G L ++  VS  R L G
Sbjct: 27  VPLLLLVLWQLTSMSGLLQSRILPAPTAVLTAFWS----LLISGELWQHVKVSTARALTG 82

Query: 68  FFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIF 127
             + G   + LGLL G   + ++L DTT+++LR IP LA +PL + WFGI ES+  F++ 
Sbjct: 83  LAVGGGLGLLLGLLNGSSKVASNLLDTTLQMLRNIPALALIPLVILWFGIDESAKLFLVA 142

Query: 128 IGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIA 187
           IG FFPI INT  G++SV   +IE  K+ G + + + + +++P + P IL GLR   G+ 
Sbjct: 143 IGVFFPIYINTYHGIRSVDPQLIEMGKSYGLNRRQLYQQIILPGAMPSILVGLRFALGLV 202

Query: 188 WMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFC 247
           W+ ++ AE +  + +G+GY+ M A    + +IV+  +++  ++G + D   + +E+    
Sbjct: 203 WVLLIVAETI-SAQSGIGYMTMNAREFLQTDIVLVGILLYALLGKLADILAQGLERYLLR 261

Query: 248 W 248
           W
Sbjct: 262 W 262