Pairwise Alignments

Query, 692 a.a., ATP-dependent protease LonB from Methanococcus maripaludis S2

Subject, 812 a.a., ATP-dependent protease from Pseudomonas simiae WCS417

 Score = 66.6 bits (161), Expect = 4e-15
 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 8/115 (6%)

Query: 554 LSKKLVSDGTLSIAKAKGEVAKEDLDLAEHEIYIQFSQSYSKIDGDSATAAACLSIISSL 613
           L + + S G + +    G    ++  LA     I   QSY  +DGDSA+     ++IS+L
Sbjct: 608 LGQPIHSKGVMILTGYLGSRYAQEFPLAI-SASIALEQSYGYVDGDSASLGEACTLISAL 666

Query: 614 LNIPLKQDFCITGSLDLNGEILAIGGVNEKI-------NAAKEYGFKRVIIPQSN 661
              PLKQ F ITGS++  GE+ A+GGVNEKI        A    G +  IIPQ+N
Sbjct: 667 SKTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPQAN 721



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 12/72 (16%)

Query: 6  FKTTDELPKPSPNLINQVIGQDEAVKIVLSAVKNKR---HALLLGDPGVGKSMMVKAF-- 60
          F TT++L          V+GQ+ AV+ +   V   R   +  ++G+PG G+   VK +  
Sbjct: 27 FSTTNDLEP-----FRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYLK 81

Query: 61 --GQLLEHSSDF 70
            G+ L+  +D+
Sbjct: 82 AEGKRLQTPADW 93