Pairwise Alignments

Query, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  192 bits (488), Expect = 1e-53
 Identities = 122/340 (35%), Positives = 184/340 (54%), Gaps = 22/340 (6%)

Query: 20  FVLIIALIIISIY-SLCTGDFQLSISQIINSLL--------GSGDASSNLVIWNIRLPRI 70
           FV +  L +++I+ SL  G   L +   + + L          G   + L++  IRLPR 
Sbjct: 11  FVGLALLCVLAIWLSLALGPVSLPLLDTLKAALRLMGLPIEAQGLEQAELILGQIRLPRT 70

Query: 71  FAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAESTGHIA 130
              +  G  L++SG  MQ + RNPLA P  +G+S GA  GA VAI+    GG+   G   
Sbjct: 71  LLGLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAAVAIV----GGSFFGGLPD 126

Query: 131 INNPYSITIFAFLGSLLGVCAVLILAKLKGLSPEA-MVLAGVAISSLFTAATTLIQYFAD 189
              PY ++  AFLG L     V  L +  G +  A M+LAG+A+++L ++A  L  Y AD
Sbjct: 127 AFGPYLLSFCAFLGGLGVTALVYRLGRRNGQTNVATMLLAGIALTALASSAVGLFTYLAD 186

Query: 190 DMQLAAMVYWSFGDLGRP----LWPEVKIMAFVAFVSLIYFIHKRWDYNALESGEETAKS 245
           D  L  + +W+ G L       LWP + + A VA    ++   +    NAL  GE  A  
Sbjct: 187 DATLRTLTFWNLGSLNGASYSRLWPLLLVSAGVA----MWLPRRAKALNALLLGESEANH 242

Query: 246 LGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFG 305
           LG++ + ++   +   +L     VA  G+IGFVGL+ PH++R+  G D+R L+P   + G
Sbjct: 243 LGIDVEGLKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVRLLAGPDHRVLLPASVLAG 302

Query: 306 AVLVLLADTIARTIISPIILPVGILTSFLGAPMFLYLLTK 345
           A L+L AD +AR  ++P  LP+GI+T+F+GAP FLYLL +
Sbjct: 303 ASLLLFADLVARLALAPAELPIGIVTAFIGAPFFLYLLLR 342