Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 241 a.a., sugar ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score = 94.0 bits (232), Expect = 2e-24
 Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 20/242 (8%)

Query: 2   LQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIY 61
           L+ + L+     +++++D+ L I+ G+   L GPNGAGK+T    I+G  + +  +G + 
Sbjct: 4   LKAQHLAKAYKSRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAD--QGRVL 61

Query: 62  FKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAISKRSDE--------EMEEM 113
               D++  PMH RA+ GIG   Q       + +   I AI +   E        E+E +
Sbjct: 62  IDDLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKELDRDGRRKELESL 121

Query: 114 AKRLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGII 173
            +  +I H  + +L +  SGGE +R E+ +  A  P  ++ DEP +GVD  +V  +  II
Sbjct: 122 LQEFHINHI-RDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQII 180

Query: 174 NHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEIL-NEIIKN 232
           +HL  K          G++IT           + A+++ DG +   G    IL N+++K 
Sbjct: 181 HHLKAKG--------IGVLITDHNVRETLDICETAYIVNDGQLIAEGDSATILANDLVKE 232

Query: 233 GY 234
            Y
Sbjct: 233 VY 234