Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 254 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score = 89.4 bits (220), Expect = 7e-23
 Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 32/243 (13%)

Query: 2   LQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIY 61
           L + D+SV  G  + +  +   +E+G  H L GPNGAGKST  N I  +  Y    G++ 
Sbjct: 7   LDVRDISVVFGGLKAVNGLSFEVEQGRIHALIGPNGAGKSTTFNCI--SRFYTPSSGSVT 64

Query: 62  FKGKDITDMPMHERAQLGIGISYQS------PPAISGVRLET------MINAISKRSDEE 109
           F+G+++T +  H  A LGI  ++Q+         +  V L T       +  + +R D E
Sbjct: 65  FEGRELTSVSPHRMASLGIARTFQNLELFAELSVLENVLLGTHSRGAATLGRLLRRPDRE 124

Query: 110 MEEMAKRL-------NIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVD 162
            E+ A  L       + RH   RDL+     G  K  EL +  A  P L++ DEP +G+ 
Sbjct: 125 TEDFAMHLLERVGLADERHQPARDLDF----GRQKLLELARALAIRPKLLLLDEPAAGLR 180

Query: 163 VENVELLGGIINHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTP 222
              +E L  ++  L+ +D        + L++ H+  ++  +  D+  V+  G     GTP
Sbjct: 181 NREIESLDRLLKELVARD------GITVLLVEHVMQLVMSIS-DRITVMAFGEKIAEGTP 233

Query: 223 DEI 225
            EI
Sbjct: 234 SEI 236