Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

 Score = 97.1 bits (240), Expect = 3e-25
 Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 20/242 (8%)

Query: 2   LQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIY 61
           L+ + L+     +++++D+ L I+ G+   L GPNGAGK+T    I+G  + E  +G + 
Sbjct: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAE--QGRVL 61

Query: 62  FKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAISK-RSD-------EEMEEM 113
               D++  PMH RA+ GIG   Q       + +   I AI + R D       +E+E +
Sbjct: 62  IDNLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELESL 121

Query: 114 AKRLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGII 173
            +  +I H  + +L +  SGGE +R E+ +  A  P  ++ DEP +GVD  +V  +  II
Sbjct: 122 LQEFHISHI-RDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQII 180

Query: 174 NHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEIL-NEIIKN 232
           +HL  K          G++IT           + A+++ DG +   G  + IL NE++K 
Sbjct: 181 HHLKAKG--------IGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKE 232

Query: 233 GY 234
            Y
Sbjct: 233 VY 234